Insertion junction: CLIP2.069678_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069678
Chromosome:chromosome 16
Location:4627177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670750 (1 of 1) IPR012312//IPR012827 - Haemerythrin-like // Haemerythrin, metal-binding domain 3'UTR
Cre16.g670754 (1 of 1) PTHR10217//PTHR10217:SF512 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGCCTTCGCCCGGTGTACTTTGCCATCAGGGGTCGTATCTTGTTTTT
Internal bar code:GTATGCAGGCTCCTGCCAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1103
LEAP-Seq percent confirming:82.6667
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:ATTACTGACCGTGCTTGGGG
Suggested primer 2:AGCAGAAACAGAGACGGGTG