Insertion junction: CLIP2.069683_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069683
Chromosome:chromosome 6
Location:4786873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279700 (1 of 1) PTHR15535:SF22 - PROTEIN RLIB 3'UTR
Cre06.g279750 MAP1A (1 of 1) PTHR10804//PTHR10804:SF13 - PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P // METHIONINE AMINOPEPTIDASE 1; Methionine aminopeptidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGATCGGACGAAGTGCTTCTGGGGTGTCTTGTATCGAGCAGCCCCAA
Internal bar code:GGGTGTGCCAGAGTACATTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5061
LEAP-Seq percent confirming:95.0617
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAGTATTGTGTGGTCCC
Suggested primer 2:TCGAACGCAACAGGGATTCA