Insertion junction: CLIP2.069696_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069696
Chromosome:chromosome 12
Location:5457188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529800 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGATGCAGAGTGATGGTCGGCACAGCAGCCGTGGGCCCCGATGTCA
Internal bar code:GGGGTGTTACTCCCTGGGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2025
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTCTCCGTGTTGACTGA
Suggested primer 2:GGTGGTGGAGAAGGTGATGG