Insertion junction: CLIP2.069698_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069698
Chromosome:chromosome 8
Location:2018355
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g368700 RMT4 Putative protine N-methyltransferase; (1 of 1) PTHR13271//PTHR13271:SF40 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAACCCACTGGCCCGTAATAACACGTGCGCAAAGTGTGAGAGAAGATC
Internal bar code:AATGCTATCGGTTGCTACCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2032
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTTGCCGATGAGAACGT
Suggested primer 2:TAGGAGAGGCAATGGGACGA