Insertion junction: CLIP2.069705_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069705
Chromosome:chromosome 8
Location:128054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358534 (1 of 2) IPR000679//IPR001025 - Zinc finger, GATA-type // Bromo adjacent homology (BAH) domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACGGGAGTCTCATGTGCGTAGAAAGCGATGACGCATATTTCTTGCAG
Internal bar code:GCGCCTGTCTAAATATCTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2501
LEAP-Seq percent confirming:72.5
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACTGAACAGTGGTCGA
Suggested primer 2:ATGATCTGGACTGGCCTTGC