Insertion junction: CLIP2.069710_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069710
Chromosome:chromosome 11
Location:3712461
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g801327 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTCAGGTCAGGCAGGGGCCCAAACCGGGCGCTGCTGCGTCTGCTGGT
Internal bar code:CCTTTTAGAGAGCATCGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1400
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACATGCAAACAGGGCG
Suggested primer 2:CAGTACCTATACGGCGGCAG