Insertion junction: CLIP2.069714_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069714
Chromosome:chromosome 17
Location:6008385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742600 (1 of 100) IPR001810 - F-box domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCTGATGGGTGTTTGTACGGTAGCTCGTAGCAAGGCAGAGCGGTGTT
Internal bar code:GTAGTTCTTGATGATGTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTCGGTCTGCCCAGAAA
Suggested primer 2:TAGGCACGTCAGCTCAAGTG