Insertion junction: CLIP2.069718_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069718
Chromosome:chromosome 16
Location:6365629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675600 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain 3'UTR
Cre16.g675630 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCCCAGCGCTAGCCTAGTGGATAAATTAATAGAGTCGTGCAATCTA
Internal bar code:CGAAGGTGTCGTTATTAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGATACTTGGTTCAAGCG
Suggested primer 2:GACGGAGGGAAACACTGGAG