Insertion junction: CLIP2.069740_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069740
Chromosome:chromosome 2
Location:314227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075100 TPR3 (1 of 1) PTHR22904//PTHR22904:SF356 - TPR REPEAT CONTAINING PROTEIN // TETRATRICOPEPTIDE REPEAT PROTEIN 1; Tetratricopeptide-repeat protein 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCCATGCCGTACGACACCGCACCCACTCGGCCTACGTCAACCCGGC
Internal bar code:TTATGAAGGTGTCGCGCTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2478
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAAGCCGTGACCAATCGA
Suggested primer 2:AAATCACCATGGCCCCAGAG