Insertion junction: CLIP2.069740_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069740
Chromosome:chromosome 2
Location:314237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075100 TPR3 (1 of 1) PTHR22904//PTHR22904:SF356 - TPR REPEAT CONTAINING PROTEIN // TETRATRICOPEPTIDE REPEAT PROTEIN 1; Tetratricopeptide-repeat protein 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCAAACCCGCACGCTCGGAGGGCTCTGGGAGTCGCCCGGGGCAAAT
Internal bar code:CAACCCGTTAGGCACCGAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4075
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCACCATGGCCCCAGAG
Suggested primer 2:TGAAAGCCGTGACCAATCGA