Insertion junction: CLIP2.069741_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069741
Chromosome:chromosome 12
Location:4588675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCTTGTCTTGAGCGTGTGTGTACGAGCTCGGAATACTGTGTGCATGT
Internal bar code:CGGGAGCATGGGCAATTGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1714
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGTTTGATGACGGCTGA
Suggested primer 2:GGAGAGCGTGATCGAGACTG