Insertion junction: CLIP2.069741_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069741
Chromosome:chromosome 12
Location:4588684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAGACAAGACAAGACAAGACAAGAAAGTGGTTTTGCCTCTCGAGGGAA
Internal bar code:CGGGAGCATGGGCAATTGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:353
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGCGTGATCGAGACTG
Suggested primer 2:TCACGTTTGATGACGGCTGA