Insertion junction: CLIP2.069743_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069743
Chromosome:chromosome 2
Location:1138351
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g080850 CYN47,CYN11 Cyclophilin 47; (1 of 1) IPR003582//IPR029000 - ShKT domain // Cyclophilin-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGCTGGTGCTGAACACCTCGCTGGGGCAGGTGCGCGGTGGCCGGCG
Internal bar code:GGAACCGCTCTAATGATCTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:257
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAAATACAGGCGACCAC
Suggested primer 2:GCGGTGGAAATGAGGAAGGA