Insertion junction: CLIP2.069751_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069751
Chromosome:chromosome 11
Location:1713300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468150 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCTTCACTTGCTAGCGTTTTGCTTCTGTGCTGTTGCTGCATTGCCTTC
Internal bar code:ACAGTTTTGGCGTCGTAGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2611
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCCAAACATAATCCCCA
Suggested primer 2:GTTGCAGATTACAGCTCGCG