Insertion junction: CLIP2.069768_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069768
Chromosome:chromosome 6
Location:7650793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302100 (1 of 1) PTHR12907//PTHR12907:SF10 - EGL NINE HOMOLOG-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGGAGTAGCAGAACCCCTGGGTGCGTGGCTAAGAAAGGGCGACTCA
Internal bar code:ATCGGTAGTAACGGTCGCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTGAGGCTCCTGCATAG
Suggested primer 2:GGGATACGAGCAGGGATTGG