Insertion junction: CLIP2.069775_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069775
Chromosome:chromosome 6
Location:7951049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304300 POA6 20S proteasome alpha subunit F; (1 of 1) K02725 - 20S proteasome subunit alpha 6 (PSMA1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCCTGTGAGGCACCGAACTTGCAAAACTTGCCCTGGCTCCATTCCG
Internal bar code:ATCATTATATACTTTGCCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCGGCGATGATTTGTA
Suggested primer 2:CACGGCCTCCATAGCGTATT