Insertion junction: CLIP2.069781_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069781
Chromosome:chromosome 16
Location:4607093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670900 SMM50 (1 of 14) PF10294 - Lysine methyltransferase (Methyltransf_16); S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGCGCAAGGCATGCCGGCCCAAAGTCAACGTGCATGTGGCATGCATT
Internal bar code:CCCTTGGGATGCGGCCCGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:991
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGATAGCGGTGTATGCTT
Suggested primer 2:AATTGATCGCAGGCAGGGAA