Insertion junction: CLIP2.069788_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069788
Chromosome:chromosome 3
Location:4582808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176450 (1 of 17) IPR029069 - HotDog domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCAGCACCCAAGAAGTGCTTGAAGGGCTTGCAACATCGGCAAGCACT
Internal bar code:CATTGAGAGATGGCGACCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:1.75439
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGCACAGACCTTGTTG
Suggested primer 2:ACATCCGTAAACCGTCGCTT