Insertion junction: CLIP2.069788_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069788
Chromosome:chromosome 3
Location:4583696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176450 (1 of 17) IPR029069 - HotDog domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGTGATGACTGCTGGGGTCCAGTTCAACTTGAGTCGCTCGGCCAATG
Internal bar code:CATTGAGAGATGGCGACCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCGTAAACCGTCGCTT
Suggested primer 2:GTGCTGCACAGACCTTGTTG