Insertion junction: CLIP2.069789_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069789
Chromosome:chromosome 2
Location:3338379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097900 AST3 (1 of 1) K00811 - aspartate aminotransferase, chloroplastic (ASP5); Aspartate aminotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGCAGCCCGCACTTCACAACCCCAACCAGTGCTCGCTGCACCGAAT
Internal bar code:ACGAAGTTGGAAACTGTACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:195
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGACATTTGGCCTAAGGG
Suggested primer 2:GCACCAAACTGCATGCTGAA