Insertion junction: CLIP2.069790_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069790
Chromosome:chromosome 12
Location:2827373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503450 (1 of 52) PF00856 - SET domain (SET) 5'UTR
Cre12.g503500 GLG1 Similar to Golgi apparatus protein 1; (1 of 4) K06816 - golgi apparatus protein 1 (GLG1, ESL1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATAAAGCCCAGCAGCATGCAGCCCGACTCCGCTAGTTAGTATGTTTCC
Internal bar code:GTCCGGGGCGGCTACAGGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2180
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCGCCTATTTCAATGAA
Suggested primer 2:CCGATCAGTCCGACTACACG