Insertion junction: CLIP2.069791_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069791
Chromosome:chromosome 4
Location:39732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214097 (1 of 1) 3.2.1.162 - Lambda-carrageenase / Endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCGTTGCTGTACCGCATACACTGTCTTGCGCTTTATTATTTGTTGTG
Internal bar code:TGCTACATTCTAAGCTCTACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1516
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACCCTCACTCACACAC
Suggested primer 2:ACCTGCGAGAACGTGGTTAG