Insertion junction: CLIP2.069792_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069792
Chromosome:chromosome 10
Location:503725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGACTTGACTTTCAGTTTTCGGAGACCGGCTTTGCAGGCAAAAGGAA
Internal bar code:CGGTATATATGAGTGGGATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:318
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTCAACTCGTGTAGCG
Suggested primer 2:CAAGGTTGCACGGGTTTCAG