Insertion junction: CLIP2.069793_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069793
Chromosome:chromosome 11
Location:1788698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467750 5'UTR
Cre11.g467800 (1 of 1) PF06545 - Protein of unknown function (DUF1116) (DUF1116) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACAGAGTGCCCTTTCTTCATTCCTTCACAGACAGCCGAGCTCGTTGC
Internal bar code:TTTACTTCAGGGCGTCGAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1420
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCCAGTTGAGGCGACAA
Suggested primer 2:TGCTACCGCTATAACCGCTG