Insertion junction: CLIP2.069799_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069799
Chromosome:chromosome 2
Location:5645744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115600 MSC7 Predicted protein with mechanosensitive ion channel domain; (1 of 1) IPR002048//IPR006685//IPR010920//IPR020568 - EF-hand domain // Mechanosensitive ion channel MscS // LSM domain // Ribosomal protein S5 domain 2-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCTGACTTTCAGGCCTCAGCTGCCAATCCGATTTTGTTGCTCTGATA
Internal bar code:ATAATCCCCCAGACATCCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3894
LEAP-Seq percent confirming:55.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCATCATGCGGCAATGC
Suggested primer 2:GGTTACACGCAACCAACACC