Insertion junction: CLIP2.069800_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069800
Chromosome:chromosome 1
Location:2781671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017050 MCP1 (1 of 22) IPR018108//IPR023395 - Mitochondrial substrate/solute carrier // Mitochondrial carrier domain; Mitochondrial substrate carrier protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGATTTGACATTGTCGGGAAGTCGGGCAGGCCAACTGCAACTTCG
Internal bar code:TGTGACACAGAAATCGATATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:883
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTACACCAGCAGCTTGTC
Suggested primer 2:AAATGGCAGGAGGTAGGTGC