Insertion junction: CLIP2.069804_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069804
Chromosome:chromosome 3
Location:4324285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800330 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCGGTCGACTGAAACGGACCCTTTGAACCCCCGCGAACTTTCGCAAA
Internal bar code:TGGTTCCAGTTTAAATCCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1329
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCAAACTTAGCCGTATG
Suggested primer 2:GAAGCTGTTCGCCACACTTG