Insertion junction: CLIP2.069814_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069814
Chromosome:chromosome 6
Location:564927
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g253755 OTU2a,MT0618,155027 (1 of 1) IPR003323//IPR003903//IPR019400 - OTU domain // Ubiquitin interacting motif // Peptidase C65, otubain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGCATGCGTAAGTATGACTGAGACAAGAGGGATATCGGTTGTGCTG
Internal bar code:ATGTATCCACTTCTGGGATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:831
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCCTGTCTCACCCTCC
Suggested primer 2:GGCCCGACAAAGAACACAAC