Insertion junction: CLIP2.069834_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069834
Chromosome:chromosome 7
Location:5294576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349850 (1 of 1) IPR000104//IPR001680//IPR017986//IPR020472 - Antifreeze protein, type I // WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTCCGTGACTCGTCACTCCTCAATCGTCCTCATCCTCGTCGTCCTC
Internal bar code:CAACACGACAAAAAGCCTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGCTTGTTTTGTGTCAG
Suggested primer 2:GCATCTCTTCAAGCGCCATG