Insertion junction: CLIP2.069834_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069834
Chromosome:chromosome 7
Location:5294577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349850 (1 of 1) IPR000104//IPR001680//IPR017986//IPR020472 - Antifreeze protein, type I // WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGTGCCGCAGGGTTGTGGACATGGACAGGTGTGGTTGGTTTGGGCTG
Internal bar code:CAACACGACAAAAAGCCTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1531
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCTCTTCAAGCGCCATG
Suggested primer 2:CGGGGCTTGTTTTGTGTCAG