Insertion junction: CLIP2.069842_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069842
Chromosome:chromosome 9
Location:3245789
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g394843 (1 of 1) PF07967 - C3HC zinc finger-like (zf-C3HC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGGTGGGGCAAGCTGTCGTGGTGGCACAGAGGTGATGGGGCATGCT
Internal bar code:CGGGATGAACAATTGTGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:287
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAACGCCTAGCTAGCAC
Suggested primer 2:ACTATCGGCAGTGACCCTCT