Insertion junction: CLIP2.069846_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069846
Chromosome:chromosome 6
Location:2370269
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g268200 TGD1 Lipid transfer machine permease; (1 of 1) PTHR30188//PTHR30188:SF2 - ABC TRANSPORTER PERMEASE PROTEIN-RELATED // PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTCGGAGCACCACTTGCCCGCCTAGCACCATACAGGCGACCGTCCGGA
Internal bar code:GTCACGTCATACTTCACAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GACGAGCTCCTTGATACCGG
Suggested primer 2:CTGTGGAAACTAGTGGCGGT