Insertion junction: CLIP2.069849_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069849
Chromosome:chromosome 17
Location:2648148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716800 XUV7 Xanthine/uracil/vitamin C permease-like, sodium-dependent 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCCGTTGCACTGGCTGGCAGCACTGCTGGCGCTGGAGAGGGGCCTGC
Internal bar code:TATATGCACAGGCTTAGCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGGTTGTGCCTTTGTGG
Suggested primer 2:CTCGGACCTCGACGTCAATG