Insertion junction: CLIP2.069852_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069852
Chromosome:chromosome 9
Location:4578922
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g401367 (1 of 1) PTHR15189:SF7 - BRCA1-A COMPLEX SUBUNIT BRE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCCATTCTGCCTCCCTCCCTCCCCTCCCTCCCATCCATTCTGCCTC
Internal bar code:TGCTGCTCCTGCCCTAGCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:57
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCATGTACAGATCGACG
Suggested primer 2:CAGTTGTGTATACGCGCTGC