Insertion junction: CLIP2.069854_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069854
Chromosome:chromosome 3
Location:2298210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157751 (1 of 1) IPR011047//IPR018391//IPR027295 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat // Quinonprotein alcohol dehydrogenase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTATGCGCACGCAAAGTCACAAGTCCATATGCTAAGCGATCAGCGTG
Internal bar code:ATGTGTTTTTCTCGTATCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4747
LEAP-Seq percent confirming:93.1507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTACTACCGCAGAGCTGA
Suggested primer 2:TGGCTGAGGTTGTATGGCTG