Insertion junction: CLIP2.069858_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069858
Chromosome:chromosome 1
Location:5912426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGGATCGAAGGAAAGCACAAGAAGATAGACTAGAATGAGGTTCAGG
Internal bar code:TTTGGGTGTTCGAAACCACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1936
LEAP-Seq percent confirming:52.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTACTGCACACCGACC
Suggested primer 2:ATGTATGTAGTGCCGCGGAG