Insertion junction: CLIP2.069862_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069862
Chromosome:chromosome 3
Location:6020780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189700 (1 of 2) K07735 - putative transcriptional regulator (algH) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAGCTTCTGGTGTGCCAGACGGTTACCTACTGCACTTTGCGGATGGG
Internal bar code:CGAAGGTTTTGGCAATCGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3112
LEAP-Seq percent confirming:98.6928
LEAP-Seq n confirming:151
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:153

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACAAAAGAACACGAGCG
Suggested primer 2:GCCAATTGCCTACCCTGACT