Insertion junction: CLIP2.069871_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069871
Chromosome:chromosome 6
Location:3067892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275000 paralog of LCI36; (1 of 4) K15382 - solute carrier family 50 (sugar transporter) (SLC50A, SWEET) 3'UTR
Cre06.g275050 GGH2 (1 of 2) 3.4.19.9 - Gamma-glutamyl hydrolase / Pteroyl-poly-alpha-glutamate hydrolase; Gamma-glutamyl hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCAATGCATGCTCTCAGAGGCTCAGACTGCGGGTGTGTAAAGTCCTG
Internal bar code:GGGTACGGTCTTGGACCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCGTTTGACTTGGTGG
Suggested primer 2:CGCGTGTGTGTGTTTGTGAT