Insertion junction: CLIP2.069873_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069873
Chromosome:plastome
Location:186759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802331 2716963,ChreCp066,psbC (1 of 1) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC); photosystem II 43 kDa protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTACAAGAGGATTTTTGTTGTTAAAGGTTTCACCATATTTATTATTTA
Internal bar code:TTTATTTGTCTGGGGAAGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:84
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGGAGCCCAAGTATCG
Suggested primer 2:ATAAGGGCTGCACGATAGCG