Insertion junction: CLIP2.069875_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069875
Chromosome:chromosome 6
Location:7169712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298400 (1 of 34) IPR001878 - Zinc finger, CCHC-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTTCTGACCGATATCTCAACACTCCCCCGCGGGCAGAACTCCATACT
Internal bar code:GGTTCAGCAGCAGCGTCTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2944
LEAP-Seq percent confirming:16.9811
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:88
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTATGATGCCGGTAGTGC
Suggested primer 2:ATCGCTCAGCTCATCATGGG