Insertion junction: CLIP2.069877_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069877
Chromosome:chromosome 1
Location:2647648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016001 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCTGAAGCTCGTTGCGCTGGCCTTTGTGATAGCCACGTTACAGGCCG
Internal bar code:TCTGTACTAGGATTCAGTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1322
LEAP-Seq percent confirming:78.6408
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTTGAACTACGGGAG
Suggested primer 2:CTAGGCCGACATGTGTGTGT