Insertion junction: CLIP2.069887_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069887
Chromosome:chromosome 7
Location:1906355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325745 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGTGAGGTGCGAATACGTCTCGGAGGCGAGTGGGAGGCGGGCCCCG
Internal bar code:GAGTAGGCAGCATCCCGGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1477
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGTCCAGATGCGTCTCG
Suggested primer 2:ACATACTCACACAGGCCTGC