Insertion junction: CLIP2.069889_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069889
Chromosome:chromosome 12
Location:6063827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534945 (1 of 2) K18740 - exonuclease 3'-5' domain-containing protein 1 (EXD1, EGL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAGTTTACACACAGCTCACACGCAGCTTCCCAAACGGCACGCCCGCG
Internal bar code:TGGTCTCGCATAACCTCCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1495
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACCTCGCTTATTGCATG
Suggested primer 2:GCTGGCTTTTGGTGCATTGA