Insertion junction: CLIP2.069890_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069890
Chromosome:chromosome 1
Location:6625356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047218 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAACATTTAAATCTACCAGGGTACTTCGTGTGTGTACAGTTTACAGT
Internal bar code:GACGCGATTTTGAGATTTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3079
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTCAGCGTGTTTGTTGG
Suggested primer 2:GCCACCACCTCTTTCTCCTC