Insertion junction: CLIP2.069894_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069894
Chromosome:chromosome 13
Location:4284037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592200 GLT1,GSN1 Glutamate synthase, NADH-dependent; (1 of 1) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTGCCCTAAACGCGTTTGGAGTGCAGCGATGGAGTGAGCGGCGCCCC
Internal bar code:CTTCATGCCTTCAACCGGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4672
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTACGCGATGGTGATACG
Suggested primer 2:CGTTCTCCGGGTCAAACAGA