Insertion junction: CLIP2.069906_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069906
Chromosome:chromosome 10
Location:5539507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATATGTAATGTGTATACGCACACTTAATACGAACCAGACTGGTGCTAC
Internal bar code:AAGTGGTTGGTACTGGACTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3234
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCGCAGTTCCATGAGGT
Suggested primer 2:TGTGTCTGTATGGGGGCAAC