Insertion junction: CLIP2.069911_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069911
Chromosome:chromosome 6
Location:7255951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800731 (1 of 17) PF00415 - Regulator of chromosome condensation (RCC1) repeat (RCC1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTAATTACCCCATGCCTCCAAAGTGTCGAGTTCAGAAAAGCATTACA
Internal bar code:CATTGGGGGTCGACGCAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2935
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCTTGTTTGCGGACATT
Suggested primer 2:GCTGGTAGCCTGGGACAATT