Insertion junction: CLIP2.069914_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069914
Chromosome:chromosome 15
Location:1652319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750697 OPR111,NCL37 Nuclear Control of chloroplast Like 37; (1 of 1) 2.4.99.3 - Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase / GalNAc alpha-2,6-sialyltransferase I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCACGGGTCAGCGGTGGCAGTGGCCGGGGCCCAGGGCGCGTGTGTGG
Internal bar code:AGTACGGTTCGGTTCGATATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1442
LEAP-Seq percent confirming:69.697
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATTGCATTGGAAGGGGG
Suggested primer 2:ACACACGGCTTGTCATTTGC