Insertion junction: CLIP2.069916_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069916
Chromosome:chromosome 17
Location:2934206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCGGGGTGTCCAACTCGGCGGTTAGCTGTCGGTTGCCACCGACATTT
Internal bar code:TGGGGTCATGTTGATTAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:68.5714
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTCGACGACAGAGCGTA
Suggested primer 2:CATGGTGTGGGGATTGAGCT