Insertion junction: CLIP2.069924_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069924
Chromosome:chromosome 12
Location:3779132
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g514450 SPL20 Pre-mRNA splicing factor; (1 of 1) K12829 - splicing factor 3B subunit 2 (SF3B2, SAP145, CUS1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCGCCGCCTGCTTGCGCTTCTGCTGCGCCGCCTTCGCCGCCACCAG
Internal bar code:GAATTATGGATTGTGCCTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAACAGCAGGCCTCAGAG
Suggested primer 2:GGCTACAGTCCAGCACCAAT